STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IV71_GL000022Unannotated protein. (395 aa)    
Predicted Functional Partners:
IV71_GL000646
Unannotated protein; Belongs to the pyruvate kinase family.
   
 0.831
IV71_GL000604
Unannotated protein.
  
  
 
0.825
IV71_GL000607
Unannotated protein; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.
    
  0.692
IV71_GL000973
Unannotated protein.
    
  0.692
truB
Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
   0.636
IV71_GL000610
Unannotated protein.
  
 0.618
IV71_GL000630
Unannotated protein; Belongs to the aspartokinase family.
  
 0.618
IV71_GL000020
Unannotated protein; Belongs to the ribF family.
       0.535
IV71_GL000023
Unannotated protein.
 
    
0.516
IV71_GL000628
Unannotated protein.
  
 0.447
Your Current Organism:
Fructobacillus fructosus
NCBI taxonomy Id: 1631
Other names: ATCC 13162, CCUG 32246, CIP 102985, DSM 20349, F. fructosus, LMG 9498, LMG:9498, Lactobacillus fructosus, Leuconostoc fructosum, Leuconostoc fructosus, NBRC 3516, NCIMB 10784, NRRL B-2041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.