STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IV71_GL000460Unannotated protein. (921 aa)    
Predicted Functional Partners:
GCA_001047095_01178
Unannotated protein.
 
  
 0.858
IV71_GL000474
Unannotated protein.
 
    0.781
IV71_GL000459
Unannotated protein.
       0.779
IV71_GL000461
Unannotated protein.
       0.773
IV71_GL001366
Unannotated protein.
   
 
 0.739
IV71_GL000458
Unannotated protein.
       0.551
IV71_GL000545
Unannotated protein.
 
     0.503
IV71_GL000462
Unannotated protein.
       0.447
IV71_GL000483
Unannotated protein.
 
     0.423
Your Current Organism:
Fructobacillus fructosus
NCBI taxonomy Id: 1631
Other names: ATCC 13162, CCUG 32246, CIP 102985, DSM 20349, F. fructosus, LMG 9498, LMG:9498, Lactobacillus fructosus, Leuconostoc fructosum, Leuconostoc fructosus, NBRC 3516, NCIMB 10784, NRRL B-2041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.