STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IV71_GL001028Unannotated protein. (180 aa)    
Predicted Functional Partners:
rpmA
Unannotated protein; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.895
rplS
Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
   
 
 0.891
rpmF
Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family.
   
   0.891
rpsB
Unannotated protein; Belongs to the universal ribosomal protein uS2 family.
   
   0.890
GCA_001047095_00446
Unannotated protein.
  
   0.888
rplO
Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
   0.887
rpsE
Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
   
   0.884
rpsO
Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
   0.884
rpsP
Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.
   
   0.882
rpsI
Unannotated protein; Belongs to the universal ribosomal protein uS9 family.
  
   0.882
Your Current Organism:
Fructobacillus fructosus
NCBI taxonomy Id: 1631
Other names: ATCC 13162, CCUG 32246, CIP 102985, DSM 20349, F. fructosus, LMG 9498, LMG:9498, Lactobacillus fructosus, Leuconostoc fructosum, Leuconostoc fructosus, NBRC 3516, NCIMB 10784, NRRL B-2041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.