STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT52963.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (145 aa)    
Predicted Functional Partners:
SIT52962.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.956
nodQ
Bifunctional enzyme NodQ (Includes: Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.799
SIT52964.1
Oxidoreductase.
 
     0.685
SIT53320.1
Response regulator SirA; Belongs to the sulfur carrier protein TusA family.
  
  
 0.607
SIT53610.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.607
SIT52961.1
Metal ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
       0.523
troB
Zinc transport system ATP-binding protein TroB.
       0.487
SIT52960.1
ABC-3 protein.
       0.487
SIT57175.1
Beta-lactamase.
 
     0.472
Your Current Organism:
Mesorhizobium prunaredense
NCBI taxonomy Id: 1631249
Other names: CFBP 8437, LMG 29641, LMG:29641, M. prunaredense, Mesorhizobium prunaredense Mohamad et al. 2018, Mesorhizobium sp. STM4676, Mesorhizobium sp. STM4864, Mesorhizobium sp. STM4891, strain STM4891
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.