STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjjNPutative L-galactonate oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (338 aa)    
Predicted Functional Partners:
SIT55842.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
  0.782
yuxG
Uncharacterized oxidoreductase YuxG.
    
  0.622
SIT58429.1
Short-chain dehydrogenase.
    
  0.622
rbsA-7
Ribose import ATP-binding protein RbsA 2.
  
    0.590
rbsC-5
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
  
    0.584
soxA-2
Sarcosine oxidase subunit alpha.
  
 
 0.558
soxA-3
Sarcosine oxidase subunit alpha.
  
 
 0.558
soxA-4
Sarcosine oxidase subunit alpha.
  
 
 0.558
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.543
SIT58017.1
Putative propane monooxygenase reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.540
Your Current Organism:
Mesorhizobium prunaredense
NCBI taxonomy Id: 1631249
Other names: CFBP 8437, LMG 29641, LMG:29641, M. prunaredense, Mesorhizobium prunaredense Mohamad et al. 2018, Mesorhizobium sp. STM4676, Mesorhizobium sp. STM4864, Mesorhizobium sp. STM4891, strain STM4891
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