STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT57647.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (159 aa)    
Predicted Functional Partners:
SIT57646.1
Glutamine amidotransferase class-I.
 
     0.811
SIT57648.1
HemY domain protein.
 
     0.807
SIT57649.1
Putative phage tail protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.720
SIT57650.1
Uroporphyrinogen III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
       0.535
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
       0.522
SIT56458.1
Phasin.
  
     0.497
SIT54194.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.482
SIT54973.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.478
SIT57747.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.476
SIT56208.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.467
Your Current Organism:
Mesorhizobium prunaredense
NCBI taxonomy Id: 1631249
Other names: CFBP 8437, LMG 29641, LMG:29641, M. prunaredense, Mesorhizobium prunaredense Mohamad et al. 2018, Mesorhizobium sp. STM4676, Mesorhizobium sp. STM4864, Mesorhizobium sp. STM4891, strain STM4891
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.