STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049895_00286Unannotated protein. (340 aa)    
Predicted Functional Partners:
GCA_001049895_00287
Unannotated protein.
 
 0.999
GCA_001049895_00288
Unannotated protein.
 
 0.996
GCA_001049895_00284
Unannotated protein.
  
  
 0.920
GCA_001049895_02304
Unannotated protein.
    
   0.868
GCA_001049895_01238
Unannotated protein.
 
 
 0.839
GCA_001049895_00364
Unannotated protein.
 
 
 0.834
GCA_001049895_00285
Unannotated protein.
       0.800
GCA_001049895_01239
Unannotated protein.
    
 0.798
GCA_001049895_00709
Unannotated protein.
  
 
 0.777
GCA_001049895_02189
Unannotated protein.
 
 
 0.775
Your Current Organism:
Rubeoparvulum massiliense
NCBI taxonomy Id: 1631346
Other names: Bacillaceae bacterium mt6, CSUR P1473, DSM 100479, R. massiliense, strain mt6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.