STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049895_01260Unannotated protein. (349 aa)    
Predicted Functional Partners:
GCA_001049895_01258
Unannotated protein.
 
 
 0.993
GCA_001049895_01261
Unannotated protein.
  
 0.992
GCA_001049895_01262
Unannotated protein.
 
 
 0.965
GCA_001049895_01257
Unannotated protein.
 
  
 0.881
GCA_001049895_01263
Unannotated protein.
 
  
 0.871
GCA_001049895_01259
Unannotated protein.
 
     0.855
GCA_001049895_01431
Unannotated protein.
  
 
 0.811
GCA_001049895_00469
Unannotated protein.
  
 
 0.707
GCA_001049895_02474
Unannotated protein.
   
 
 0.604
GCA_001049895_02020
Unannotated protein.
     
 0.601
Your Current Organism:
Rubeoparvulum massiliense
NCBI taxonomy Id: 1631346
Other names: Bacillaceae bacterium mt6, CSUR P1473, DSM 100479, R. massiliense, strain mt6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.