STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049895_01275Unannotated protein. (292 aa)    
Predicted Functional Partners:
GCA_001049895_01975
Unannotated protein.
 
 0.990
GCA_001049895_02671
Unannotated protein.
 
 0.882
GCA_001049895_02525
Unannotated protein.
    
   0.819
GCA_001049895_01551
Unannotated protein.
   
 
  0.634
GCA_001049895_01333
Unannotated protein.
  
 
 0.606
GCA_001049895_01793
Unannotated protein.
   
 0.538
GCA_001049895_00025
Unannotated protein.
  
 0.514
GCA_001049895_01402
Unannotated protein.
  
 0.514
GCA_001049895_01480
Unannotated protein.
  
 
 0.507
GCA_001049895_01669
Unannotated protein.
  
 
 0.507
Your Current Organism:
Rubeoparvulum massiliense
NCBI taxonomy Id: 1631346
Other names: Bacillaceae bacterium mt6, CSUR P1473, DSM 100479, R. massiliense, strain mt6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.