STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGR6A_Cc120174Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
AGR6A_Cc20039
Uncharacterized protein.
  
     0.761
AGR6A_Cc80295
Uncharacterized protein.
  
     0.753
AGR6A_Cc80294
Uncharacterized protein.
  
     0.749
AGR6A_Cc120032
Uncharacterized protein.
  
     0.745
AGR6A_Cc20045
Uncharacterized protein.
  
     0.742
AGR6A_Cc60157
Uncharacterized protein.
  
     0.736
AGR6A_Cc140112
Uncharacterized protein.
  
     0.731
AGR6A_Lc130010
Uncharacterized protein.
  
     0.729
AGR6A_Cc120036
Putative peptidoglycan binding protein.
  
     0.722
AGR6A_Cc80281
Uncharacterized protein.
  
     0.722
Your Current Organism:
Agrobacterium sp. NCPPB925
NCBI taxonomy Id: 1631629
Other names: A. sp. NCPPB 925, Agrobacterium genomosp. 6 str. NCPPB 925, Agrobacterium sp. NCPPB 925
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.