STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGR6A_Cc140187Soluble lytic murein transglycosylase-like protein. (188 aa)    
Predicted Functional Partners:
motB
Flagellar motor protein, PAL/OmpA family.
 
    0.947
motC
Chemotaxis protein MotC.
 
     0.941
AGR6A_Cc140191
Uncharacterized protein.
 
     0.930
motD
Chemotaxis protein.
 
    0.877
flgL
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   0.867
fliE
Flagellar hook-basal body complex protein FliE.
 
  
 0.867
flaA
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   0.857
flgK
Flagellar hook associated protein.
 
    0.851
AGR6A_Cc140199
Uncharacterized protein.
 
   0.850
flaF
FLAF protein.
 
     0.823
Your Current Organism:
Agrobacterium sp. NCPPB925
NCBI taxonomy Id: 1631629
Other names: A. sp. NCPPB 925, Agrobacterium genomosp. 6 str. NCPPB 925, Agrobacterium sp. NCPPB 925
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