STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APS40923.1Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (338 aa)    
Predicted Functional Partners:
APS40925.1
Oligopeptide transport system permease protein OppB.
 0.997
APS40926.1
Oligopeptide transport system permease protein OppC.
 
 0.997
APS40927.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
 
 
 0.991
APS41185.1
Oligopeptide transport system permease protein OppC.
  
 0.965
APS40924.1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
  
0.920
ecfA-2
ATPase component of general energizing module of ECF transporters; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
     
0.863
APS41184.1
Oligopeptide transport system permease protein OppB.
 
 0.830
APS41187.1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
  
0.663
phnC
Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     
0.466
APS40922.1
aminoacyl-tRNA editing enzymes YbaK, ProX.
       0.421
Your Current Organism:
Weissella jogaejeotgali
NCBI taxonomy Id: 1631871
Other names: JCM 30589, KCCM 43128, W. jogaejeotgali, Weissella jogaejeotgali Lee et al. 2015, Weissella sp. FOL01, strain FOL01
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.