STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APS41710.1ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (300 aa)    
Predicted Functional Partners:
APS41709.1
ABC transporter substrate-binding protein.
    0.972
APS41711.1
ABC transporter ATP-binding protein.
 
    0.967
APS41708.1
ABC transporter substrate-binding protein.
    0.950
APS42300.1
ABC transporter substrate-binding protein.
    0.946
APS42298.1
ABC transporter ATP-binding protein.
 
    0.862
APS41712.1
MORN motif family protein.
       0.463
APS41713.1
Acyltransferase family.
       0.463
APS41714.1
Diadenosine tetraphosphatase and related serine/threonine protein phosphatase.
       0.428
Your Current Organism:
Weissella jogaejeotgali
NCBI taxonomy Id: 1631871
Other names: JCM 30589, KCCM 43128, W. jogaejeotgali, Weissella jogaejeotgali Lee et al. 2015, Weissella sp. FOL01, strain FOL01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.