STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049915_00035Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_001049915_00034
Unannotated protein.
 0.999
GCA_001049915_00033
Unannotated protein.
 
   
 0.930
GCA_001049915_02901
Unannotated protein.
 
     
0.895
GCA_001049915_02476
Unannotated protein.
   
 
 0.867
GCA_001049915_00663
Unannotated protein.
 
  
 0.866
GCA_001049915_02456
Unannotated protein.
 
  
 0.809
GCA_001049915_02678
Unannotated protein.
  
 0.785
GCA_001049915_00813
Unannotated protein.
 
     
0.759
GCA_001049915_00032
Unannotated protein.
       0.737
GCA_001049915_00917
Unannotated protein.
 
     
0.730
Your Current Organism:
Drancourtella massiliensis
NCBI taxonomy Id: 1632013
Other names: CSUR P1506, D. massiliensis, DSM 100357, Ruminococcaceae bacterium GD1, strain GD1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.