STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049915_00280Unannotated protein. (385 aa)    
Predicted Functional Partners:
GCA_001049915_00281
Unannotated protein.
 0.983
GCA_001049915_01622
Unannotated protein.
 0.945
GCA_001049915_01405
Unannotated protein.
 0.939
GCA_001049915_01933
Unannotated protein.
0.938
GCA_001049915_00057
Unannotated protein.
 0.935
GCA_001049915_00443
Unannotated protein.
 0.924
GCA_001049915_02707
Unannotated protein.
 0.921
GCA_001049915_00516
Unannotated protein.
   
 0.918
GCA_001049915_01400
Unannotated protein.
 0.918
GCA_001049915_01032
Unannotated protein.
 0.917
Your Current Organism:
Drancourtella massiliensis
NCBI taxonomy Id: 1632013
Other names: CSUR P1506, D. massiliensis, DSM 100357, Ruminococcaceae bacterium GD1, strain GD1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.