STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049915_00398Unannotated protein. (203 aa)    
Predicted Functional Partners:
GCA_001049915_00400
Unannotated protein.
 
  
  0.944
GCA_001049915_00401
Unannotated protein.
 
  
  0.943
GCA_001049915_00399
Unannotated protein.
 
  
  0.942
GCA_001049915_00253
Unannotated protein.
   
 0.864
GCA_001049915_00538
Unannotated protein.
 
  
  0.863
GCA_001049915_02721
Unannotated protein.
   
 0.863
GCA_001049915_00539
Unannotated protein.
 
  
  0.859
GCA_001049915_00537
Unannotated protein.
 
  
  0.857
GCA_001049915_01765
Unannotated protein.
  
 0.836
GCA_001049915_00678
Unannotated protein.
    
 0.763
Your Current Organism:
Drancourtella massiliensis
NCBI taxonomy Id: 1632013
Other names: CSUR P1506, D. massiliensis, DSM 100357, Ruminococcaceae bacterium GD1, strain GD1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.