STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049915_01007Unannotated protein. (385 aa)    
Predicted Functional Partners:
GCA_001049915_00483
Unannotated protein.
  
 
 0.587
GCA_001049915_02859
Unannotated protein.
  
 
 0.587
GCA_001049915_02404
Unannotated protein.
 
     0.453
GCA_001049915_00407
Unannotated protein.
  
 
 0.443
GCA_001049915_01161
Unannotated protein.
  
 
 0.443
GCA_001049915_01162
Unannotated protein.
  
 
 0.443
GCA_001049915_01496
Unannotated protein.
  
 
 0.443
GCA_001049915_02020
Unannotated protein.
  
     0.435
GCA_001049915_02019
Unannotated protein.
  
     0.418
GCA_001049915_02599
Unannotated protein.
  
     0.407
Your Current Organism:
Drancourtella massiliensis
NCBI taxonomy Id: 1632013
Other names: CSUR P1506, D. massiliensis, DSM 100357, Ruminococcaceae bacterium GD1, strain GD1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.