STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049915_01637Unannotated protein. (442 aa)    
Predicted Functional Partners:
GCA_001049915_01636
Unannotated protein.
 
  
 0.953
GCA_001049915_01933
Unannotated protein.
     
 0.827
GCA_001049915_02754
Unannotated protein.
 
  
 0.799
GCA_001049915_00342
Unannotated protein.
  
 0.718
GCA_001049915_02401
Unannotated protein.
  
 0.718
GCA_001049915_01639
Unannotated protein.
 
     0.649
GCA_001049915_01638
Unannotated protein.
       0.520
GCA_001049915_01758
Unannotated protein.
  
  
  0.510
GCA_001049915_01635
Unannotated protein.
       0.487
GCA_001049915_01640
Unannotated protein.
       0.472
Your Current Organism:
Drancourtella massiliensis
NCBI taxonomy Id: 1632013
Other names: CSUR P1506, D. massiliensis, DSM 100357, Ruminococcaceae bacterium GD1, strain GD1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.