STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049915_02605Unannotated protein. (200 aa)    
Predicted Functional Partners:
GCA_001049915_00892
Unannotated protein.
   
  0.872
GCA_001049915_00516
Unannotated protein.
 
 0.818
GCA_001049915_01223
Unannotated protein.
 
  
 0.656
GCA_001049915_02604
Unannotated protein.
       0.614
GCA_001049915_01310
Unannotated protein.
    
  0.596
GCA_001049915_01463
Unannotated protein.
    
  0.596
GCA_001049915_02600
Unannotated protein.
  
 
 0.573
GCA_001049915_01064
Unannotated protein.
    
 
 0.550
GCA_001049915_00518
Unannotated protein.
   
 
 0.496
GCA_001049915_01766
Unannotated protein.
   
 
 0.496
Your Current Organism:
Drancourtella massiliensis
NCBI taxonomy Id: 1632013
Other names: CSUR P1506, D. massiliensis, DSM 100357, Ruminococcaceae bacterium GD1, strain GD1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.