STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCT_0459Pyridoxamine 5'-phosphate oxidase; K07226. (234 aa)    
Predicted Functional Partners:
SCT_0458
Membrane protein.
       0.793
SCT_3129
ABC transporter substrate-binding protein; K06858.
  
    0.759
SCT_1073
Iron permease; K07243.
   
    0.571
SCT_0680
Pyruvate:ferredoxin (flavodoxin) oxidoreductase,homodimeric; K03737.
    
   0.570
SCT_0460
Ribonuclease BN; K07058.
       0.552
SCT_0291
Glutamate synthase; K00265.
     
 0.529
SCT_2102
TonB-dependent receptor; K02014.
  
  
 0.495
SCT_0685
ABC transporter; K02013.
  
  
 0.482
Your Current Organism:
Sulfuricella sp. T08
NCBI taxonomy Id: 1632857
Other names: S. sp. T08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.