STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCT_0982Spermidine/putrescine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (379 aa)    
Predicted Functional Partners:
SCT_0981
Spermidine/putrescine ABC transporter permease; K11070.
 
 0.999
SCT_0980
ABC transporter permease; K11071.
 
 
 0.997
SCT_0979
Spermidine/putrescine ABC transporter ATP-binding protein; K11072; Belongs to the ABC transporter superfamily.
 
 
 0.996
SCT_2744
Hypothetical protein.
    
  0.610
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
     
 0.536
SCT_0570
ABC transporter substrate-binding protein; K01999.
     
 0.532
SCT_2344
ABC transporter substrate-binding protein; K11959.
     
 0.532
SCT_0573
Amino acid ABC transporter ATPase; K01996.
  
  
 0.525
SCT_0667
Nitrate ABC transporter ATP-binding protein; K15578.
    
  0.482
SCT_0978
Membrane protein.
     
 0.482
Your Current Organism:
Sulfuricella sp. T08
NCBI taxonomy Id: 1632857
Other names: S. sp. T08
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.