STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKO50041.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)    
Predicted Functional Partners:
KKO50042.1
Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.998
KKO50043.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KKO50040.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.991
KKO50150.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.983
KKO50039.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.601
KKO50037.1
Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.498
KKO50038.1
Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
KKO50036.1
Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.426
KKO50035.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.425
KKO50034.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.423
Your Current Organism:
Arsukibacterium sp. MJ3
NCBI taxonomy Id: 1632859
Other names: A. sp. MJ3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.