STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_1Macrolide export ATP-binding/permease protein MacB. (463 aa)    
Predicted Functional Partners:
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
   0.987
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
 
   0.978
lolD_4
Lipoprotein-releasing system ATP-binding protein LolD.
 
   0.976
lolD_6
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
   0.976
bceA_1
Bacitracin export ATP-binding protein BceA.
 
   0.975
ytrE
ABC transporter ATP-binding protein YtrE.
 
   0.972
lolD_3
Lipoprotein-releasing system ATP-binding protein LolD.
 
   0.968
bceA_2
Bacitracin export ATP-binding protein BceA.
 
   0.965
macB_2
Macrolide export ATP-binding/permease protein MacB.
 
   0.961
AMV17550.1
Putative ABC transporter ATP-binding protein.
 
   0.961
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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