STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntB_1Manganese transport system membrane protein MntB. (444 aa)    
Predicted Functional Partners:
znuC
High-affinity zinc uptake system ATP-binding protein ZnuC.
 0.999
troA
Periplasmic zinc-binding protein TroA precursor; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
mntB_2
Manganese transport system membrane protein MntB.
 
 
0.988
fur
Ferric uptake regulation protein; Belongs to the Fur family.
 
  
 0.859
perR
Transcriptional regulator PerR; Belongs to the Fur family.
  
  
 0.836
acxA
Acetone carboxylase beta subunit.
  
  
 0.836
AMV16286.1
Hypothetical protein.
  
  
 0.785
AMV17251.1
Natural resistance-associated macrophage protein.
  
  
 0.785
AMV18954.1
Hypothetical protein.
  
  
 0.785
AMV19860.1
Hypothetical protein.
   
 
 0.636
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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