STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV18330.1Hypothetical protein. (334 aa)    
Predicted Functional Partners:
AMV21082.1
Bacterial type II/III secretion system short domain protein.
  
     0.760
AMV21065.1
Von Willebrand factor type A domain protein.
  
     0.756
mraZ
Cell division protein MraZ; Belongs to the MraZ family.
  
     0.723
AMV18674.1
Cytochrome c.
  
     0.711
AMV22108.1
Hypothetical protein.
  
     0.698
AMV17063.1
Planctomycete cytochrome C.
  
     0.685
AMV16994.1
Radical SAM superfamily protein.
  
     0.666
AMV17976.1
MG2 domain protein.
  
     0.654
AMV17618.1
Hypothetical protein.
  
    0.652
AMV18603.1
Putative major pilin subunit.
  
     0.630
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.