STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV18445.1ABC transporter ATP-binding/permease protein. (817 aa)    
Predicted Functional Partners:
AMV16656.1
ABC-2 family transporter protein.
  
  
 0.843
AMV16811.1
ABC-2 family transporter protein.
  
  
 0.843
AMV18169.1
Putative NAD(P)H nitroreductase.
  
  
 0.838
AMV22195.1
Malonic semialdehyde reductase.
  
  
 0.838
gltB_2
Ferredoxin-dependent glutamate synthase 1.
  
   0.643
sucA
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.632
AMV16662.1
ABC-type uncharacterized transport system.
  
 
 0.603
uvrY
Response regulator UvrY.
  
  
 0.598
AMV19156.1
Tetratricopeptide repeat protein.
 
 
 0.566
ybaL_1
Inner membrane protein YbaL; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.557
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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