STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysBHTH-type transcriptional regulator CysB; Belongs to the LysR transcriptional regulatory family. (335 aa)    
Predicted Functional Partners:
AMV16354.1
Transposase DDE domain protein.
  
     0.670
AMV16848.1
Transposase DDE domain protein.
  
     0.670
AMV17010.1
Transposase DDE domain protein.
  
     0.670
AMV18051.1
Transposase DDE domain protein.
  
     0.670
AMV19711.1
Transposase DDE domain protein.
  
     0.670
AMV19736.1
Transposase DDE domain protein.
  
     0.670
AMV19749.1
Transposase DDE domain protein.
  
     0.670
AMV18447.1
RyR domain protein.
 
     0.659
AMV18450.1
Hypothetical protein.
       0.529
AMV19466.1
Hypothetical protein.
  
     0.466
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.