STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV18656.1Hypothetical protein. (475 aa)    
Predicted Functional Partners:
AMV20248.1
Planctomycete cytochrome C.
 
     0.779
AMV18865.1
Planctomycete cytochrome C.
 
     0.778
AMV16790.1
Planctomycete cytochrome C.
  
     0.775
AMV16989.1
Planctomycete cytochrome C.
  
     0.775
AMV17065.1
Planctomycete cytochrome C.
  
     0.775
AMV17146.1
Planctomycete cytochrome C.
  
     0.775
AMV17494.1
Planctomycete cytochrome C.
  
     0.775
xly_1
Xanthan lyase precursor.
  
     0.775
AMV17645.1
Planctomycete cytochrome C.
  
     0.775
AMV17649.1
Planctomycete cytochrome C.
  
     0.775
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.