Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
galM | glcK | VT03_18560 | VT03_14020 | Aldose 1-epimerase. | Glucokinase. | 0.906 |
galM | glkA_1 | VT03_18560 | VT03_12175 | Aldose 1-epimerase. | Glucokinase. | 0.906 |
galM | glkA_2 | VT03_18560 | VT03_13745 | Aldose 1-epimerase. | Glucokinase. | 0.906 |
galM | mro | VT03_18560 | VT03_26875 | Aldose 1-epimerase. | Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. | 0.900 |
galM | yihX | VT03_18560 | VT03_07815 | Aldose 1-epimerase. | Alpha-D-glucose-1-phosphate phosphatase YihX. | 0.901 |
glcK | galM | VT03_14020 | VT03_18560 | Glucokinase. | Aldose 1-epimerase. | 0.906 |
glcK | glkA_1 | VT03_14020 | VT03_12175 | Glucokinase. | Glucokinase. | 0.925 |
glcK | glkA_2 | VT03_14020 | VT03_13745 | Glucokinase. | Glucokinase. | 0.924 |
glcK | legG | VT03_14020 | VT03_18855 | Glucokinase. | GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolyzing). | 0.914 |
glcK | mro | VT03_14020 | VT03_26875 | Glucokinase. | Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. | 0.919 |
glcK | pgiB | VT03_14020 | VT03_05145 | Glucokinase. | Glucose-6-phosphate isomerase B. | 0.935 |
glcK | tal | VT03_14020 | VT03_17355 | Glucokinase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.840 |
glcK | xylA | VT03_14020 | VT03_04370 | Glucokinase. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.837 |
glcK | yihX | VT03_14020 | VT03_07815 | Glucokinase. | Alpha-D-glucose-1-phosphate phosphatase YihX. | 0.904 |
glcK | zwf | VT03_14020 | VT03_19325 | Glucokinase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.838 |
glkA_1 | galM | VT03_12175 | VT03_18560 | Glucokinase. | Aldose 1-epimerase. | 0.906 |
glkA_1 | glcK | VT03_12175 | VT03_14020 | Glucokinase. | Glucokinase. | 0.925 |
glkA_1 | glkA_2 | VT03_12175 | VT03_13745 | Glucokinase. | Glucokinase. | 0.918 |
glkA_1 | legG | VT03_12175 | VT03_18855 | Glucokinase. | GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolyzing). | 0.914 |
glkA_1 | mro | VT03_12175 | VT03_26875 | Glucokinase. | Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. | 0.918 |
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