STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV19160.1Hypothetical protein; Aerotolerance regulator N-terminal. (632 aa)    
Predicted Functional Partners:
AMV19161.1
Von Willebrand factor type A domain protein.
    0.985
AMV19159.1
Hypothetical protein.
 
    0.887
AMV19162.1
Hypothetical protein.
 
     0.870
AMV19156.1
Tetratricopeptide repeat protein.
 
   
 0.836
AMV20622.1
Hypothetical protein.
  
     0.665
AMV21076.1
Magnesium chelatase, subunit ChlI.
  
 
 0.637
AMV19157.1
ATPase family associated with various cellular activities (AAA).
 
    0.577
AMV22585.1
Tetratricopeptide repeat protein.
  
     0.561
AMV22601.1
Hypothetical protein.
 
     0.540
AMV19146.1
Hypothetical protein.
  
     0.497
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.