STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkC_10Serine/threonine-protein kinase PrkC. (816 aa)    
Predicted Functional Partners:
stp_1
Serine/threonine phosphatase stp.
  
   0.782
stp_2
Serine/threonine phosphatase stp.
  
   0.780
pknB_32
Serine/threonine-protein kinase PknB.
  
     0.775
AMV16273.1
Putative protein phosphatase 2C-type.
  
   0.774
prkC_25
Serine/threonine-protein kinase PrkC.
  
     0.774
stkP_1
Serine/threonine-protein kinase StkP.
  
     0.769
stp_3
Serine/threonine phosphatase stp.
  
   0.734
spkF
Serine/threonine-protein kinase F.
  
     0.717
cph2
Phytochrome-like protein cph2.
       0.714
AMV19165.1
Hypothetical protein.
       0.526
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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