Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMV19875.1 | glgE2 | VT03_18405 | VT03_15230 | Hypothetical protein. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.788 |
| AMV19875.1 | treS_1 | VT03_18405 | VT03_15235 | Hypothetical protein. | Trehalose synthase/amylase TreS. | 0.788 |
| AMV19875.1 | treS_2 | VT03_18405 | VT03_32135 | Hypothetical protein. | Trehalose synthase/amylase TreS. | 0.788 |
| amyA | glgA | VT03_06090 | VT03_24010 | Alpha-amylase 1. | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.935 |
| amyA | glgB_1 | VT03_06090 | VT03_09005 | Alpha-amylase 1. | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.902 |
| amyA | glgB_2 | VT03_06090 | VT03_15240 | Alpha-amylase 1. | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.902 |
| amyA | glgE2 | VT03_06090 | VT03_15230 | Alpha-amylase 1. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.907 |
| amyA | treS_1 | VT03_06090 | VT03_15235 | Alpha-amylase 1. | Trehalose synthase/amylase TreS. | 0.919 |
| amyA | treS_2 | VT03_06090 | VT03_32135 | Alpha-amylase 1. | Trehalose synthase/amylase TreS. | 0.919 |
| glgA | amyA | VT03_24010 | VT03_06090 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Alpha-amylase 1. | 0.935 |
| glgA | glgB_1 | VT03_24010 | VT03_09005 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.996 |
| glgA | glgB_2 | VT03_24010 | VT03_15240 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.996 |
| glgA | glgE2 | VT03_24010 | VT03_15230 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.953 |
| glgA | treS_1 | VT03_24010 | VT03_15235 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Trehalose synthase/amylase TreS. | 0.882 |
| glgA | treS_2 | VT03_24010 | VT03_32135 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Trehalose synthase/amylase TreS. | 0.882 |
| glgB_1 | amyA | VT03_09005 | VT03_06090 | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Alpha-amylase 1. | 0.902 |
| glgB_1 | glgA | VT03_09005 | VT03_24010 | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.996 |
| glgB_1 | glgB_2 | VT03_09005 | VT03_15240 | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.904 |
| glgB_1 | glgE2 | VT03_09005 | VT03_15230 | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.940 |
| glgB_1 | treS_1 | VT03_09005 | VT03_15235 | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Trehalose synthase/amylase TreS. | 0.974 |
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