STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV19865.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
AMV19867.1
Hypothetical protein; Aerotolerance regulator N-terminal.
 
     0.854
ravA_5
ATPase RavA.
 
    0.787
AMV19868.1
Hypothetical protein.
 
     0.765
AMV16995.1
Hypothetical protein; Aerotolerance regulator N-terminal.
 
    0.764
AMV21899.1
Hypothetical protein; Aerotolerance regulator N-terminal.
 
    0.730
AMV20849.1
Hypothetical protein; Aerotolerance regulator N-terminal.
 
    0.714
AMV20530.1
Hypothetical protein; Aerotolerance regulator N-terminal.
  
    0.688
AMV20531.1
Hypothetical protein.
  
     0.676
AMV17919.1
Hypothetical protein; Aerotolerance regulator N-terminal.
  
    0.654
AMV20533.1
Hypothetical protein.
 
    0.648
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.