STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galMAldose 1-epimerase. (314 aa)    
Predicted Functional Partners:
glkA_1
Glucokinase.
    
 0.906
glkA_2
Glucokinase.
    
 0.906
glcK
Glucokinase.
    
 0.906
ppgK
Polyphosphate glucokinase.
    
 0.906
yihX
Alpha-D-glucose-1-phosphate phosphatase YihX.
   
 
  0.901
mro
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
     
 
0.900
entB
Isochorismatase.
  
    0.658
galT
Galactose-1-phosphate uridylyltransferase.
  
 
 0.597
AMV21817.1
Ycf48-like protein precursor.
  
     0.497
AMV18330.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.