Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMV16570.1 | AMV18162.1 | VT03_01690 | VT03_09755 | Prephenate dehydrogenase. | DNA utilization protein GntX. | 0.830 |
AMV16570.1 | AMV20393.1 | VT03_01690 | VT03_21020 | Prephenate dehydrogenase. | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | 0.485 |
AMV16570.1 | apt | VT03_01690 | VT03_29910 | Prephenate dehydrogenase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.823 |
AMV18162.1 | AMV16570.1 | VT03_09755 | VT03_01690 | DNA utilization protein GntX. | Prephenate dehydrogenase. | 0.830 |
AMV18162.1 | AMV20393.1 | VT03_09755 | VT03_21020 | DNA utilization protein GntX. | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | 0.524 |
AMV18162.1 | apt | VT03_09755 | VT03_29910 | DNA utilization protein GntX. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.808 |
AMV20393.1 | AMV16570.1 | VT03_21020 | VT03_01690 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Prephenate dehydrogenase. | 0.485 |
AMV20393.1 | AMV18162.1 | VT03_21020 | VT03_09755 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | DNA utilization protein GntX. | 0.524 |
AMV20393.1 | AMV20394.1 | VT03_21020 | VT03_21025 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.664 |
AMV20393.1 | apt | VT03_21020 | VT03_29910 | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.509 |
AMV20394.1 | AMV20393.1 | VT03_21025 | VT03_21020 | Hypothetical protein. | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | 0.664 |
apt | AMV16570.1 | VT03_29910 | VT03_01690 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Prephenate dehydrogenase. | 0.823 |
apt | AMV18162.1 | VT03_29910 | VT03_09755 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | DNA utilization protein GntX. | 0.808 |
apt | AMV20393.1 | VT03_29910 | VT03_21020 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family. | 0.509 |