STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV20498.1Peptidase family M50. (721 aa)    
Predicted Functional Partners:
AMV20500.1
Hypothetical protein.
 
     0.804
macB_4
Macrolide export ATP-binding/permease protein MacB; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 
 0.785
AMV18115.1
HlyD family secretion protein.
  
     0.768
AMV21202.1
HlyD family secretion protein.
 
     0.753
AMV18028.1
Hypothetical protein.
  
     0.751
AMV20499.1
Putative efflux pump membrane fusion protein.
 
     0.555
AMV17716.1
Outer membrane efflux protein.
  
   0.503
AMV16500.1
Hypothetical protein.
  
     0.453
AMV21417.1
Outer membrane efflux protein.
  
   0.446
AMV20622.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.