STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolG_12Inositol 2-dehydrogenase. (408 aa)    
Predicted Functional Partners:
idhA
Inositol 2-dehydrogenase.
  
     0.763
gfo_3
Glucose--fructose oxidoreductase precursor.
  
     0.759
ycjS_2
Putative oxidoreductase YcjS.
  
     0.754
yhhX
Putative oxidoreductase YhhX.
  
     0.636
ydgJ_2
Putative oxidoreductase YdgJ.
  
     0.624
iolE_2
Inosose dehydratase.
  
    0.620
AMV22747.1
Hypothetical protein.
  
     0.606
AMV17981.1
Hypothetical protein.
  
     0.565
AMV20687.1
Hypothetical protein.
  
     0.559
AMV22701.1
Hypothetical protein.
  
     0.521
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.