Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMV18731.1 | AMV22407.1 | VT03_12610 | VT03_31220 | Metallo-beta-lactamase superfamily protein. | Sigma-70, region 4. | 0.579 |
AMV22407.1 | AMV18731.1 | VT03_31220 | VT03_12610 | Sigma-70, region 4. | Metallo-beta-lactamase superfamily protein. | 0.579 |
AMV22407.1 | barA_3 | VT03_31220 | VT03_20560 | Sigma-70, region 4. | Signal transduction histidine-protein kinase BarA. | 0.669 |
AMV22407.1 | garA_5 | VT03_31220 | VT03_31225 | Sigma-70, region 4. | Glycogen accumulation regulator GarA. | 0.773 |
AMV22407.1 | gloB | VT03_31220 | VT03_25925 | Sigma-70, region 4. | Hydroxyacylglutathione hydrolase. | 0.579 |
barA_3 | AMV22407.1 | VT03_20560 | VT03_31220 | Signal transduction histidine-protein kinase BarA. | Sigma-70, region 4. | 0.669 |
garA_5 | AMV22407.1 | VT03_31225 | VT03_31220 | Glycogen accumulation regulator GarA. | Sigma-70, region 4. | 0.773 |
gloB | AMV22407.1 | VT03_25925 | VT03_31220 | Hydroxyacylglutathione hydrolase. | Sigma-70, region 4. | 0.579 |