STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV22645.1Site-specific tyrosine recombinase XerC; Belongs to the 'phage' integrase family. (413 aa)    
Predicted Functional Partners:
AMV19156.1
Tetratricopeptide repeat protein.
 
     0.692
AMV18456.1
5-methylcytosine-specific restriction enzyme subunit McrC.
  
     0.685
AMV17041.1
Neutral/alkaline non-lysosomal ceramidase.
  
     0.611
soj_2
Chromosome-partitioning ATPase Soj.
 
   
 0.592
AMV22255.1
Trehalose utilization.
  
     0.581
AMV19937.1
Matrixin.
  
     0.577
AMV20914.1
Alpha/beta hydrolase family protein.
  
     0.534
AMV18162.1
DNA utilization protein GntX.
   
    0.524
traI
Multifunctional conjugation protein TraI.
  
  
 0.521
AMV17408.1
Hypothetical protein.
 
    0.513
Your Current Organism:
Planctomyces sp. SHPL14
NCBI taxonomy Id: 1632864
Other names: P. sp. SH-PL14, Planctomyces sp. SH-PL14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.