STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV35354.1Glycosyl transferase family 2. (264 aa)    
Predicted Functional Partners:
moaA_3
Cyclic pyranopterin monophosphate synthase.
 
     0.946
AMV35355.1
Glycosyl transferase family 2.
 
    
0.804
AMV31626.1
Glycosyltransferase family 25 (LPS biosynthesis protein).
 
  
  0.798
AMV35015.1
Hypothetical protein; Bacterial pre-peptidase C-terminal domain.
  
 
   0.776
AMV31341.1
Glycosyltransferase family 25 (LPS biosynthesis protein).
 
  
  0.773
AMV35356.1
Hypothetical protein.
       0.773
AMV35358.1
Hypothetical protein.
       0.773
moaA_2
Cyclic pyranopterin monophosphate synthase.
 
     0.758
AMV31620.1
Radical SAM superfamily protein.
 
     0.756
sdrC
Serine-aspartate repeat-containing protein C precursor.
  
     0.746
Your Current Organism:
Pirellula sp. SHSr6A
NCBI taxonomy Id: 1632865
Other names: P. sp. SH-Sr6A, Pirellula sp. SH-Sr6A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.