STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSBG_2608Lipase/Acylhydrolase with GDSL-like motif. (208 aa)    
Predicted Functional Partners:
DSBG_1918
Squalene--hopene cyclase.
  
     0.622
DSBG_2744
Lipase/Acylhydrolase with GDSL-like motif.
  
     0.584
DSBG_0629
Negative regulator of genetic competence MecA.
  
     0.566
DSBG_2609
Hypothetical protein.
       0.543
DSBG_2607
Hypothetical protein.
       0.542
DSBG_4147
N-acetylmuramoyl-L-alanine amidase.
 
     0.534
DSBG_2141
ABC-type sugar transport system, periplasmic component.
 
   
 0.512
DSBG_2644
TPR repeat protein.
 
     0.499
DSBG_0224
ABC transporter, permease.
  
     0.488
DSBG_2611
Uncharacterized protein.
 
     0.479
Your Current Organism:
Desulfosporosinus sp. BG
NCBI taxonomy Id: 1633135
Other names: D. sp. BG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.