Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OCX43853.1 | OCX45770.1 | A9R16_05330 | A9R16_09910 | Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.500 |
OCX45768.1 | OCX45770.1 | A9R16_09900 | A9R16_09910 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.809 |
OCX45768.1 | vapC-3 | A9R16_09900 | A9R16_09905 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.773 |
OCX45770.1 | OCX43853.1 | A9R16_09910 | A9R16_05330 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
OCX45770.1 | OCX45768.1 | A9R16_09910 | A9R16_09900 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.809 |
OCX45770.1 | OCX46388.1 | A9R16_09910 | A9R16_06890 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
OCX45770.1 | vapC-2 | A9R16_09910 | A9R16_06055 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.810 |
OCX45770.1 | vapC-3 | A9R16_09910 | A9R16_09905 | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.956 |
OCX46388.1 | OCX45770.1 | A9R16_06890 | A9R16_09910 | Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.500 |
vapC-2 | OCX45770.1 | A9R16_06055 | A9R16_09910 | Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.810 |
vapC-3 | OCX45768.1 | A9R16_09905 | A9R16_09900 | Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.773 |
vapC-3 | OCX45770.1 | A9R16_09905 | A9R16_09910 | Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.956 |