STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JGI4_01111Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (115 aa)    
Predicted Functional Partners:
JGI4_01112
Unannotated protein.
       0.773
JGI4_01113
Unannotated protein.
       0.697
gmk
Unannotated protein; Essential for recycling GMP and indirectly, cGMP.
       0.693
JGI4_01109
Unannotated protein.
       0.641
prfB
Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.597
JGI4_01293
Unannotated protein.
  
     0.595
JGI4_00138
Unannotated protein.
  
     0.583
JGI4_01290
Unannotated protein.
  
     0.579
JGI4_01338
Unannotated protein.
  
     0.576
JGI4_01809
Unannotated protein.
  
     0.573
Your Current Organism:
Kryptonium thompsoni
NCBI taxonomy Id: 1633631
Other names: C. Kryptonium thompsoni, Candidatus Kryptonium thompsoni, bacterium JGI-10, bacterium JGI-11, bacterium JGI-12, bacterium JGI-13, bacterium JGI-14, bacterium JGI-15, bacterium JGI-16, bacterium JGI-17, bacterium JGI-4, bacterium JGI-5, bacterium JGI-6, bacterium JGI-7, bacterium JGI-8, bacterium JGI-9
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