STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANA12609.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (61 aa)    
Predicted Functional Partners:
ANA12610.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
ANA12611.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.735
ANA12608.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.678
ANA12612.1
Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.410
ANA12613.1
Creatininase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.410
Your Current Organism:
Acetobacter oryzifermentans
NCBI taxonomy Id: 1633874
Other names: A. oryzifermentans, Acetobacter sp. SLV-7, JCM 31096, KACC 19301, strain SLV-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.