STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOO58035.1Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)    
Predicted Functional Partners:
KOO58739.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.929
KOO57233.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.871
KOO58034.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.824
KOO59922.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.578
KOO59881.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.499
KOO58997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.499
KOO59131.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.499
KOO58319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.499
KOO57961.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.499
KOO57962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.499
Your Current Organism:
Rheinheimera sp. KL1
NCBI taxonomy Id: 1635005
Other names: R. sp. KL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.