STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY89101.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)    
Predicted Functional Partners:
OSY87901.1
beta-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.974
OSY88031.1
Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     0.907
OSY88195.1
Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      0.859
OSY88275.1
Peptidase M15; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
      0.710
OSY89102.1
Transmembrane permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
murQ
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.646
OSY89103.1
Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.555
OSY88132.1
N-acetylglucosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.421
Your Current Organism:
Tenacibaculum holothuriorum
NCBI taxonomy Id: 1635173
Other names: LMG 27758, LMG:27758, MCCC 1A09872, T. holothuriorum, Tenacibaculum holothuriorum Wang et al. 2015, Tenacibaculum sp. S2-2, strain S2-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.