STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY88946.1Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)    
Predicted Functional Partners:
OSY87886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
OSY88306.1
cAMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
OSY87868.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.715
OSY88945.1
X-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.570
OSY88947.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
OSY89519.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.551
OSY89109.1
Porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.515
OSY88192.1
MIP family channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.515
OSY87770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.489
OSY88316.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
Your Current Organism:
Tenacibaculum holothuriorum
NCBI taxonomy Id: 1635173
Other names: LMG 27758, LMG:27758, MCCC 1A09872, T. holothuriorum, Tenacibaculum holothuriorum Wang et al. 2015, Tenacibaculum sp. S2-2, strain S2-2
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