STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY88098.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)    
Predicted Functional Partners:
OSY88169.1
Phosphoadenylylsulfate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.913
OSY88097.1
Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.864
OSY88096.1
Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
  0.751
OSY88094.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
       0.598
OSY88099.1
Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.530
OSY88092.1
Siroheme synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
OSY88093.1
uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
OSY88095.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
cysM
Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.456
OSY88091.1
ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.447
Your Current Organism:
Tenacibaculum holothuriorum
NCBI taxonomy Id: 1635173
Other names: LMG 27758, LMG:27758, MCCC 1A09872, T. holothuriorum, Tenacibaculum holothuriorum Wang et al. 2015, Tenacibaculum sp. S2-2, strain S2-2
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