STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD41_0561SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (524 aa)    
Predicted Functional Partners:
XD41_0559
Uncharacterized protein.
 
  
 0.965
XD41_0279
Acyl-CoA synthetase/AMP-acid ligase.
  
  
 0.848
XD41_0560
Uncharacterized protein.
       0.787
XD41_0563
Xylose isomerase domain protein TIM barrel.
 
     0.715
XD41_0562
CBS domain containing membrane protein.
       0.558
XD41_0558
Hypothetical protein.
       0.511
XD41_1920
AMP-dependent synthetase and ligase.
  
  
 0.471
XD41_0369
AMP-dependent synthetase and ligase.
  
  
 0.464
XD41_0564
Glutaredoxin.
       0.433
XD41_0565
Uncharacterized protein.
       0.433
Your Current Organism:
Desulfonauticus sp. 384375
NCBI taxonomy Id: 1635258
Other names: D. sp. 38_4375, Desulfonauticus sp. 38_4375
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