STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD68_0056Uncharacterized protein; Belongs to the MlaE permease family. (265 aa)    
Predicted Functional Partners:
XD68_0057
ATPase component of ABC-type transport system in organic solvents resistance.
 0.999
XD68_0058
Periplasmic component of ABC-type transport system in organic solvents resistance.
 
 0.999
XD68_0675
ABC-type multidrug transport system, ATPase and permease component.
  
 0.875
XD68_0055
SpoIVB peptidase S55.
 
     0.780
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.764
XD68_0062
PSP1 domain protein.
       0.746
XD68_0061
Putative DNA polymerase III, delta prime subunit.
       0.745
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.742
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.740
XD68_0060
Hypothetical protein.
       0.736
Your Current Organism:
Synergistales bacterium 5424
NCBI taxonomy Id: 1635272
Other names: S. bacterium 54_24, Synergistales bacterium 54_24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.